STRINGSTRING
LOC104605273 LOC104605273 LOC104597068 LOC104597068 LOC104609156 LOC104609156 LOC104591723 LOC104591723 LOC104592887 LOC104592887 LOC104601273 LOC104601273 LOC104594946 LOC104594946 LOC104595478 LOC104595478 LOC104602558 LOC104602558 LOC104607812 LOC104607812 LOC104612145 LOC104612145
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104605273Probable transcription factor PosF21. (429 aa)    
Predicted Functional Partners:
LOC104597068
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.896
LOC104609156
Polyubiquitin 9.
    
 0.887
LOC104591723
F-box protein At1g67340-like.
    
 0.876
LOC104592887
F-box protein At1g67340.
    
 0.876
LOC104601273
F-box protein At1g67340-like.
    
 0.876
LOC104594946
Transcription factor bHLH51-like.
    
 0.797
LOC104595478
Transcription factor bHLH30-like.
    
 0.797
LOC104602558
Transcription factor bHLH51-like.
    
 0.797
LOC104607812
Transcription factor bHLH106-like.
    
 0.797
LOC104612145
Transcription factor bHLH30-like.
    
 0.797
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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