STRINGSTRING
LOC104609338 LOC104609338 TTG1 TTG1 LOC104609428 LOC104609428 LOC104585639 LOC104585639 LOC104596450 LOC104596450 LOC104612399 LOC104612399 LOC104592490 LOC104592490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104609338Myb-related protein Zm38-like. (322 aa)    
Predicted Functional Partners:
TTG1
Protein TRANSPARENT TESTA GLABRA 1.
   
 
 0.509
LOC104609428
Protein TRANSPARENT TESTA 1-like.
   
 
 0.500
LOC104585639
Transducin beta-like protein 3.
   
  
 0.482
LOC104596450
Basic helix-loop-helix protein A-like.
    
 
 0.474
LOC104612399
Basic helix-loop-helix protein A-like isoform X1.
    
 
 0.474
LOC104592490
TIMELESS-interacting protein isoform X1; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.418
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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