STRINGSTRING
LOC104609975 LOC104609975 LOC104588398 LOC104588398 LOC104613309 LOC104613309 LOC104590528 LOC104590528 LOC104607358 LOC104607358 LOC104585579 LOC104585579 LOC104607195 LOC104607195 LOC104590899 LOC104590899 LOC104589157 LOC104589157 LOC104602142 LOC104602142 LOC104597594 LOC104597594
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104609975DELLA protein GAI1-like; Belongs to the GRAS family. (602 aa)    
Predicted Functional Partners:
LOC104588398
Gibberellin receptor GID1C-like.
    
 0.974
LOC104613309
Gibberellin receptor GID1C-like.
    
 0.974
LOC104590528
F-box protein GID2-like.
    
 0.936
LOC104607358
F-box protein GID2-like.
    
 0.936
LOC104585579
Transcription factor PIF3 isoform X1.
    
 0.930
LOC104607195
Transcription factor PIF3 isoform X1.
    
 0.930
LOC104590899
Transcription factor PIF5-like isoform X1.
    
 0.906
LOC104589157
Protein LUTEIN DEFICIENT 5, chloroplastic-like isoform X1; Belongs to the cytochrome P450 family.
    
 
 0.648
LOC104602142
Protein LUTEIN DEFICIENT 5, chloroplastic-like; Belongs to the cytochrome P450 family.
    
 
 0.648
LOC104597594
AAA-ATPase At4g25835-like; Belongs to the AAA ATPase family.
      
 0.591
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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