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argA argA ptsA ptsA fryA fryA argC argC argB argB rimK rimK apbE apbE mdaA mdaA ybjC ybjC grxA grxA ybjN ybjN
"rimK" - ribosomal protein S6 modification protein in Escherichia coli CFT073
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
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colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
rimKribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 (By similarity) (300 aa)    
Predicted Functional Partners:
ybjN
hypothetical protein (174 aa)
score_image score_image             0.925
mdaA
nitroreductase A (240 aa)
score_image               0.673
grxA
glutaredoxin 1 (85 aa)
score_image           score_image   0.670
ybjC
hypothetical protein (95 aa)
score_image               0.664
argC
N-acetyl-gamma-glutamyl-phosphate reductase (334 aa)
score_image           score_image   0.613
argA
N-acetylglutamate synthase (443 aa)
score_image           score_image   0.470
argB
acetylglutamate kinase (257 aa)
score_image           score_image   0.467
ptsA
phosphoenolpyruvate-protein phosphotransferase ptsA (833 aa)
score_image           score_image   0.432
fryA
phosphoenolpyruvate-protein phosphotransferase ypdD; Multifunctional protein that includes general (non sugar-specific) and sugar-specific components of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). HPr transfers the phosphoryl group to the phosphoryl carrier EIIA, which the [...] (831 aa)
score_image           score_image   0.432
apbE
thiamine biosynthesis lipoprotein ApbE (351 aa)
score_image   score_image           0.426
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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