Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | LmjF.34.0650 | 19S proteasome regulatory subunit, Metallo- peptidase, Clan MP, Family M67.[Source-GeneDB;Acc-LmjF.34.0650] (309 aa) | ||||||||||||
Predicted Functional Partners:
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 | LmjF.21.0760 | proteasome regulatory non-ATP-ase subunit 5, putative.[Source-GeneDB;Acc-LmjF.21.0760] (474 aa) |
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0.999 | |||||||
 | LmjF.32.2820 | proteasome regulatory non-ATP-ase subunit, putative.[Source-GeneDB;Acc-LmjF.32.2820] (408 aa) |
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0.999 | |||||||
 | LmjF.32.0390 | proteasome regulatory non-ATP-ase subunit 8, putative.[Source-GeneDB;Acc-LmjF.32.0390] (359 aa) |
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0.999 | |||||||
 | LmjF.07.1120 | proteasome regulatory non-ATP-ase subunit, putative.[Source-GeneDB;Acc-LmjF.07.1120] (346 aa) |
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0.999 | |||||||
 | LmjF.13.1090 | proteasome regulatory ATPase subunit 2, putative.[Source-GeneDB;Acc-LmjF.13.1090] (438 aa) |
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0.999 | |||||||
 | LmjF.27.1460 | proteasome regulatory non-ATP-ase subunit 3, putative.[Source-GeneDB;Acc-LmjF.27.1460] (334 aa) |
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0.999 | |||||||
 | LmjF.22.0570 | proteasome regulatory ATPase subunit 1, putative.[Source-GeneDB;Acc-LmjF.22.0570] (437 aa) |
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0.999 | |||||||
 | LmjF.22.0620 | proteasome regulatory ATPase subunit 5, putative.[Source-GeneDB;Acc-LmjF.22.0620] (444 aa) |
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0.999 | |||||||
 | LmjF.19.1120 | proteasome regulatory non-ATP-ase subunit, putative.[Source-GeneDB;Acc-LmjF.19.1120] (412 aa) |
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0.999 | |||||||
 | LmjF.02.0370 | proteasome regulatory non-ATPase subunit 6, putative.[Source-GeneDB;Acc-LmjF.02.0370] (527 aa) |
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0.999 | |||||||
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, L. major species complex, Leishmania (Leishmania) major, Leishmania major, Leishmania major species complex, Leishmania tropica major
Other names: L. major, L. major species complex, Leishmania (Leishmania) major, Leishmania major, Leishmania major species complex, Leishmania tropica major
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