Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | LmjF.36.6750 | serine peptidase clan SC, family S9A, putative.[Source-GeneDB;Acc-LmjF.36.6750] (697 aa) | ||||||||||||
Predicted Functional Partners:
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 | LmjF.18.0480 | uracil-DNA-glycosylase, putative.[Source-GeneDB;Acc-LmjF.18.0480]; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity) (201 aa) |
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0.745 | ||||||||||
 | INO1 | inositol-3-phosphate synthase.[Source-GeneDB;Acc-LmjF.14.1360] (526 aa) |
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0.675 | |||||||||
 | LmjF.36.2420 | dipeptidyl-peptidase 8-like serine peptidase, putative.[Source-GeneDB;Acc-LmjF.36.2420] (852 aa) |
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0.674 | ||||||||||
 | LmjF.17.1390 | myo-inositol-1(or 4)-monophosphatase 1, putative.[Source-GeneDB;Acc-LmjF.17.1390] (288 aa) |
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0.636 | ||||||||||
 | LmjF.15.0880 | myo-inositol-1 phosphatase, putative.[Source-GeneDB;Acc-LmjF.15.0880] (466 aa) |
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0.636 | ||||||||||
 | LmjF.33.2570 | metallo-peptidase, Clan MF, Family M17.[Source-GeneDB;Acc-LmjF.33.2570] (528 aa) |
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0.455 | |||||||||
 | lap | metallo-peptidase, Clan MF, Family M17.[Source-GeneDB;Acc-LmjF.23.0950] (565 aa) |
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0.455 | |||||||||
 | LmjF.11.0630 | metallo-peptidase, Clan MF, Family M17.[Source-GeneDB;Acc-LmjF.11.0630] (538 aa) |
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0.455 | |||||||||
 | LmjF.11.0620 | metallo-peptidase, Clan MF, Family M17.[Source-GeneDB;Acc-LmjF.11.0620] (292 aa) |
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0.455 | |||||||||
 | LmjF.06.0340 | serine peptidase, clan SC, family S9A-like protein.[Source-GeneDB;Acc-LmjF.06.0340] (905 aa) |
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0.403 | |||||||
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, L. major species complex, Leishmania (Leishmania) major, Leishmania major, Leishmania major species complex, Leishmania tropica major
Other names: L. major, L. major species complex, Leishmania (Leishmania) major, Leishmania major, Leishmania major species complex, Leishmania tropica major
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