Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | TGME49_068910 | Mitochondrial inner membrane protease subunit 1, putative; Mitochondrial inner membrane protease, putative (215 aa) | ||||||||||||
Predicted Functional Partners:
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 | TGME49_113100 | Signal recognition particle 54 kDa protein, putative (582 aa) |
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0.770 | ||||||||
 | TGME49_100060 | Microsomal signal peptidase 23 kD subunit, putative; Signal peptidase subunit, putative (175 aa) |
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0.769 | |||||||
 | TGME49_107980 | GTP-binding protein lepA, putative ; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner (By similarity) (638 aa) |
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0.692 | ||||||||
 | TGME49_056840 | Putative uncharacterized protein (740 aa) |
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0.651 | |||||||||
 | TGME49_080740 | Signal peptidase, putative (223 aa) |
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0.650 | ||||||||||
 | TGME49_059660 | Orotate phosphoribosyltransferase, putative (283 aa) |
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0.610 | ||||||||
 | TGME49_081510 | Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By similarity) (366 aa) |
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0.602 | |||||||||
 | TGME49_080610 | Signal recognition particle protein, putative (564 aa) |
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0.597 | ||||||||
 | TGME49_057630 | Methylenetetrahydrofolate dehydrogenase, putative (614 aa) |
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0.596 | |||||||||
 | TGME49_089750 | Ubiquitin / ribosomal protein CEP52 fusion protein, putative (129 aa) |
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0.592 | |||||||||
Your Current Organism:
Toxoplasma gondii
NCBI taxonomy Id: 5811
Other names: T. gondii, Toxoplasma, Toxoplasma gondii
Other names: T. gondii, Toxoplasma, Toxoplasma gondii
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