PBANKA_071730 protein (Plasmodium berghei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

PBANKA_071730

Plasmodium falciparum protein kinase, putative (1214 aa)

Predicted Functional Partners:

PBANKA_010920

0.999

PBANKA_051400

0.999

PBANKA_052050

0.999

PBANKA_130530

0.999

PBANKA_141340

0.999

PBANKA_123540

0.996

PBANKA_121280

0.993

PBANKA_123220

0.992

PBANKA_110900

0.980

Rbp1

0.980

Your Current Organism:

Plasmodium berghei

NCBI taxonomy Id: 5821
Other names: P. berghei, Plasmodium berghei

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PBANKA_010920	PBANKA_051400	PBANKA_010920	PBANKA_051400	trancription factor	transcription factor	0.999
PBANKA_010920	PBANKA_052050	PBANKA_010920	PBANKA_052050	trancription factor	K10843 DNA excision repair protein ERCC-3 [EC-3.6.4.12]	0.868
PBANKA_010920	PBANKA_071730	PBANKA_010920	PBANKA_071730	trancription factor	Plasmodium falciparum protein kinase, putative	0.999
PBANKA_010920	PBANKA_110900	PBANKA_010920	PBANKA_110900	trancription factor	DNA-directed RNA polymerase	0.999
PBANKA_010920	PBANKA_121280	PBANKA_010920	PBANKA_121280	trancription factor	cdk7	0.941
PBANKA_010920	PBANKA_123220	PBANKA_010920	PBANKA_123220	trancription factor	hypothetical protein	0.999
PBANKA_010920	PBANKA_123540	PBANKA_010920	PBANKA_123540	trancription factor	hypothetical protein	0.997
PBANKA_010920	PBANKA_130530	PBANKA_010920	PBANKA_130530	trancription factor	hypothetical protein	0.998
PBANKA_010920	PBANKA_141340	PBANKA_010920	PBANKA_141340	trancription factor	hypothetical protein	0.869
PBANKA_010920	Rbp1	PBANKA_010920	PBANKA_080700	trancription factor	RNA polymerase II	0.994
PBANKA_051400	PBANKA_010920	PBANKA_051400	PBANKA_010920	transcription factor	trancription factor	0.999
PBANKA_051400	PBANKA_052050	PBANKA_051400	PBANKA_052050	transcription factor	K10843 DNA excision repair protein ERCC-3 [EC-3.6.4.12]	0.708
PBANKA_051400	PBANKA_071730	PBANKA_051400	PBANKA_071730	transcription factor	Plasmodium falciparum protein kinase, putative	0.999
PBANKA_051400	PBANKA_110900	PBANKA_051400	PBANKA_110900	transcription factor	DNA-directed RNA polymerase	0.975
PBANKA_051400	PBANKA_121280	PBANKA_051400	PBANKA_121280	transcription factor	cdk7	0.821
PBANKA_051400	PBANKA_123220	PBANKA_051400	PBANKA_123220	transcription factor	hypothetical protein	0.998
PBANKA_051400	PBANKA_123540	PBANKA_051400	PBANKA_123540	transcription factor	hypothetical protein	0.992
PBANKA_051400	PBANKA_130530	PBANKA_051400	PBANKA_130530	transcription factor	hypothetical protein	0.995
PBANKA_051400	Rbp1	PBANKA_051400	PBANKA_080700	transcription factor	RNA polymerase II	0.975
PBANKA_052050	PBANKA_010920	PBANKA_052050	PBANKA_010920	K10843 DNA excision repair protein ERCC-3 [EC-3.6.4.12]	trancription factor	0.868

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