PCHAS_072300 protein (Plasmodium chabaudi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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Score

PCHAS_072300

hypothetical protein (274 aa)

Predicted Functional Partners:

PCHAS_121150

0.797

PCHAS_020070

0.779

asl

0.757

PCHAS_041550

0.734

PCHAS_123460

0.728

PCHAS_113050

0.728

PCHAS_031590

0.727

PCHAS_141040

0.725

PCHAS_061330

0.709

PCHAS_141230

0.705

Your Current Organism:

Plasmodium chabaudi

NCBI taxonomy Id: 5825
Other names: P. chabaudi, Plasmodium chabaudi

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PCHAS_020070	PCHAS_031590	PCHAS_020070	PCHAS_031590	UMP-CMP kinase, putative	ATP synthase F1, alpha subunit, putative	0.727
PCHAS_020070	PCHAS_041550	PCHAS_020070	PCHAS_041550	UMP-CMP kinase, putative	40S ribosomal protein S15A, putative	0.734
PCHAS_020070	PCHAS_061330	PCHAS_020070	PCHAS_061330	UMP-CMP kinase, putative	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)	0.970
PCHAS_020070	PCHAS_072300	PCHAS_020070	PCHAS_072300	UMP-CMP kinase, putative	hypothetical protein	0.779
PCHAS_020070	PCHAS_113050	PCHAS_020070	PCHAS_113050	UMP-CMP kinase, putative	V-type ATPase, putative	0.728
PCHAS_020070	PCHAS_121150	PCHAS_020070	PCHAS_121150	UMP-CMP kinase, putative	hypoxanthine phosphoribosyltransferase	0.797
PCHAS_020070	PCHAS_123460	PCHAS_020070	PCHAS_123460	UMP-CMP kinase, putative	Vacuolar ATP synthetase, putative	0.728
PCHAS_020070	PCHAS_141040	PCHAS_020070	PCHAS_141040	UMP-CMP kinase, putative	mitochondrial ATP synthase delta subunit	0.725
PCHAS_020070	PCHAS_141230	PCHAS_020070	PCHAS_141230	UMP-CMP kinase, putative	Vacuolar ATP synthase catalytic subunit a, putative	0.697
PCHAS_020070	asl	PCHAS_020070	PCHAS_030650	UMP-CMP kinase, putative	Adenylosuccinate lyase	0.757
PCHAS_031590	PCHAS_020070	PCHAS_031590	PCHAS_020070	ATP synthase F1, alpha subunit, putative	UMP-CMP kinase, putative	0.727
PCHAS_031590	PCHAS_041550	PCHAS_031590	PCHAS_041550	ATP synthase F1, alpha subunit, putative	40S ribosomal protein S15A, putative	0.713
PCHAS_031590	PCHAS_061330	PCHAS_031590	PCHAS_061330	ATP synthase F1, alpha subunit, putative	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)	0.490
PCHAS_031590	PCHAS_072300	PCHAS_031590	PCHAS_072300	ATP synthase F1, alpha subunit, putative	hypothetical protein	0.727
PCHAS_031590	PCHAS_113050	PCHAS_031590	PCHAS_113050	ATP synthase F1, alpha subunit, putative	V-type ATPase, putative	0.999
PCHAS_031590	PCHAS_121150	PCHAS_031590	PCHAS_121150	ATP synthase F1, alpha subunit, putative	hypoxanthine phosphoribosyltransferase	0.587
PCHAS_031590	PCHAS_123460	PCHAS_031590	PCHAS_123460	ATP synthase F1, alpha subunit, putative	Vacuolar ATP synthetase, putative	0.998
PCHAS_031590	PCHAS_141040	PCHAS_031590	PCHAS_141040	ATP synthase F1, alpha subunit, putative	mitochondrial ATP synthase delta subunit	0.999
PCHAS_031590	PCHAS_141230	PCHAS_031590	PCHAS_141230	ATP synthase F1, alpha subunit, putative	Vacuolar ATP synthase catalytic subunit a, putative	0.955
PCHAS_041550	PCHAS_020070	PCHAS_041550	PCHAS_020070	40S ribosomal protein S15A, putative	UMP-CMP kinase, putative	0.734

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