Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PCHAS_092490 | annotation not available (461 aa) | ||||||||||||
Predicted Functional Partners:
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 | PCHAS_135030 | hypothetical protein (572 aa) |
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0.902 | |||||||
 | PCHAS_143180 | hypothetical protein (1272 aa) |
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0.842 | ||||||||
 | PCHAS_070860 | annotation not available (256 aa) |
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0.822 | |||||||||
 | PCHAS_111760 | N-acetylglucosamine transferase (681 aa) |
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0.818 | |||||||||
 | PCHAS_061110 | K05284 phosphatidylinositol glycan, class M [EC-2.4.1.-] (452 aa) |
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0.812 | |||||||||
 | PCHAS_135930 | hypothetical protein (741 aa) |
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0.811 | |||||||||
 | PCHAS_112310 | N-acetylglucosaminyl-phosphatidylinositol de-n-acetylase (246 aa) |
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0.802 | ||||||||||
 | PCHAS_123070 | hypothetical protein (672 aa) |
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0.779 | ||||||||||
 | PCHAS_146260 | hypothetical protein (551 aa) |
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0.762 | |||||||||
 | PCHAS_051630 | phosphatidyl inositol glycan, class A (436 aa) |
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0.750 | ||||||||||
Your Current Organism:
Plasmodium chabaudi
NCBI taxonomy Id: 5825
Other names: P. chabaudi, Plasmodium chabaudi
Other names: P. chabaudi, Plasmodium chabaudi
