Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PCHAS_144300 | hydrolase / phosphatase (310 aa) | ||||||||||||
Predicted Functional Partners:
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 | PCHAS_100970 | Glucose-6-phosphate isomerase (578 aa) |
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0.764 | ||||||||
 | PCHAS_072830 | Bifunctional dihydrofolate reductase-thymidylate synthaseDihydrofolate reductaseThymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP (By similarity) (583 aa) |
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0.763 | |||||||||
 | PCHAS_122910 | Putative uncharacterized protein (820 aa) |
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0.736 | ||||||||
 | PCHAS_141690 | hypothetical protein (889 aa) |
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0.726 | ||||||||||
 | PCHAS_070860 | annotation not available (256 aa) |
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0.685 | ||||||||
 | PCHAS_143160 | hypothetical protein (1022 aa) |
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0.672 | ||||||||
 | PCHAS_134620 | hypothetical protein (475 aa) |
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0.672 | ||||||||
 | PCHAS_102310 | hypothetical protein (425 aa) |
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0.672 | ||||||||
 | PCHAS_102780 | Putative uncharacterized protein (569 aa) |
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0.670 | |||||||||
 | PCHAS_070360 | hypothetical protein (2459 aa) |
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0.653 | ||||||||||
Your Current Organism:
Plasmodium chabaudi
NCBI taxonomy Id: 5825
Other names: P. chabaudi, Plasmodium chabaudi
Other names: P. chabaudi, Plasmodium chabaudi
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