Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PF11_0428 | Conserved Plasmodium protein (313 aa) | ||||||||||||
Predicted Functional Partners:
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 | PFI1135c | OTU-like cysteine protease, putative (222 aa) |
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0.690 | |||||||||
 | PF13_0335 | Putative uncharacterized protein (905 aa) |
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0.686 | ||||||||
 | PFE0380c | Nuclear pore associated protein (NLP4), putative (531 aa) |
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0.656 | |||||||||
 | PFI0810c | Apicoplast Ufd1 (296 aa) |
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0.604 | ||||||||
 | MAL7P1.320 | Ribosomal protein L37; Binds to the 23S rRNA (By similarity) (92 aa) |
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0.603 | ||||||||||
 | PF08_0020 | Ubiquitination-mediated degradation component, putative (1326 aa) |
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0.571 | |||||||||
 | MAL8P1.122 | Ubiquitin regulatory protein, putative (238 aa) |
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0.570 | |||||||||
 | PFE1235c | Ubiquitin fusion degradation protein UFD1, putative (700 aa) |
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0.547 | ||||||||
 | UFD1 | Ubiquitin fusion degradation protein UFD1, putative (282 aa) |
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0.547 | ||||||||
 | PF14_0126 | AAA family ATPase, putative (1219 aa) |
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0.536 | ||||||||
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 5833
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
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