Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | SERA-5 | Serine-repeat antigen protein; It may function at the red blood cell membrane, perhaps as a component that influences the invasion process (By similarity) (997 aa) | ||||||||||||
Predicted Functional Partners:
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 | MSP1 | Merozoite surface protein 1 (1720 aa) |
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0.961 | |||||||||
 | Pf92 | Cysteine-rich surface protein (Pf92) (796 aa) |
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0.959 | |||||||||
 | MSP7 | Merozoite Surface Protein 7, MSP7 (351 aa) |
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0.954 | |||||||||
 | Pf38 | 6-cysteine protein, putative (349 aa) |
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0.947 | |||||||||
 | PFD0230c | Protease, putative (939 aa) |
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0.947 | ||||||||
 | RhopH2 | High molecular weight rhoptry protein-2 (1378 aa) |
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0.945 | |||||||||
 | MSP-9 | 101 kDa malaria antigen (743 aa) |
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0.937 | |||||||||
 | PF14_0102 | Rhoptry-associated protein 1, RAP1 (782 aa) |
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0.931 | |||||||||
 | PFI0265c | Rhoptry antigen protein (897 aa) |
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0.926 | |||||||||
 | PFI0160w | Putative uncharacterized protein (3203 aa) |
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0.921 | |||||||||
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 5833
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
