Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PFE0835w | Ubiquitin carboxyl-terminal hydrolase (1332 aa) | ||||||||||||
Predicted Functional Partners:
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 | MAL7P1.147 | Ubiquitin carboxyl-terminal hydrolase (3183 aa) |
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0.785 | |||||||||
 | PFD0680c | Ubiquitin carboxyl-terminal hydrolase a, putative (853 aa) |
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0.782 | |||||||||
 | PFE1355c | Ubiquitin carboxyl-terminal hydrolase (605 aa) |
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0.763 | ||||||||
 | PF14_0576 | Ubiquitin carboxyl-terminal hydrolase, putative (232 aa) |
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0.751 | |||||||||
 | PFD0165w | Ubiquitin specific protease, putative (400 aa) |
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0.720 | |||||||||
 | MAL13P1.64 | Ubiquitin-like protein nedd8 homologue, putative (76 aa) |
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0.671 | |||||||||
 | PFA_0220w | Ubiquitin carboxyl-terminal hydrolase, putative (3499 aa) |
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0.655 | ||||||||||
 | PF14_0145 | Ubiquitin C-terminal hydrolase, putative (1384 aa) |
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0.655 | ||||||||||
 | PF14_0652 | Putative uncharacterized protein (862 aa) |
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0.456 | ||||||||||
 | ETRAMP_13 | Early transcribed membrane protein 13, ETRAMP13 (229 aa) |
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0.424 | ||||||||||
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 5833
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
