Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PFI0215c | Signal peptidase, putative (185 aa) | ||||||||||||
Predicted Functional Partners:
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 | SP21 | Signal peptidase 21 kDa subunit (184 aa) |
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0.999 | |||||||
 | PF14_0317 | Microsomal signal peptidase protein, putative (101 aa) |
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0.975 | |||||||||
 | PFI0960w | Dolichyl-diphosphooligosaccharide-protein glycosyltransferase, putative (477 aa) |
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0.941 | ||||||||
 | PF13_0346 | 60S ribosomal protein L40/UBI, putative (128 aa) |
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0.924 | ||||||||
 | PFB0450w | Sec61 gamma subunit, putative (81 aa) |
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0.920 | ||||||||
 | PFC0295c | 40S ribosomal protein S12 (141 aa) |
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0.915 | |||||||||
 | PF14_0083 | 40S ribosomal protein S8 (218 aa) |
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0.913 | ||||||||
 | PF07_0079 | 60S ribosomal protein L11a, putative (173 aa) |
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0.912 | |||||||||
 | PFC0775w | 40S ribosomal protein S11, putative (161 aa) |
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0.912 | |||||||||
 | PF13_0129 | 60S ribosomal protein L6, putative (190 aa) |
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0.911 | |||||||||
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 5833
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
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