Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PFI1135c | OTU-like cysteine protease, putative (222 aa) | ||||||||||||
Predicted Functional Partners:
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 | PF13_0341 | DNA-directed RNA polymerase 2, putative (205 aa) |
 |
0.803 | ||||||||||
 | MAL7P1.218 | Stevor (304 aa) |
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0.795 | ||||||||||
 | PF13_0087 | Methyltransferase, putative (316 aa) |
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0.759 | ||||||||||
 | PF11_0140 | Conserved Plasmodium protein (129 aa) |
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0.752 | ||||||||||
 | PFI1030c | Ubiquitin carrier protein (163 aa) |
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0.749 | ||||||||||
 | PFB0955w | Stevor (307 aa) |
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0.747 | ||||||||||
 | PF11_0447 | Translation initiation factor eIF-1A, putative; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (By similarity) (155 aa) |
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0.729 | ||||||||||
 | PFE1173c | Outer arm dynein lc3, putative (125 aa) |
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0.705 | ||||||||||
 | MAL13P1.327 | Mitochondrial ribosomal protein S17, putative (115 aa) |
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0.704 | ||||||||||
 | PFC0545c | Putative uncharacterized protein (346 aa) |
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0.698 | ||||||||||
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 5833
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
Other names: Laverania, P. (Laverania), P. falciparum, Plasmodium (Laverania), Plasmodium (Laverania) falciparum, Plasmodium falciparum, malaria parasite P. falciparum
