Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
|
Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
|||||
 | PKH_125400 | Putative uncharacterized protein (355 aa) | ||||||||||||
Predicted Functional Partners:
| ||||||||||||||
 | PKH_094220 | Putative uncharacterized protein (260 aa) |
 |
0.790 | ||||||||||
 | PKH_082700 | Putative uncharacterized protein (769 aa) |
|
0.790 | ||||||||||
 | PKH_010920 | Cell division cycle ATPase, putative (1132 aa) |
|
0.718 | ||||||||||
 | PKH_100300 | Putative uncharacterized protein (272 aa) |
|
0.699 | ||||||||||
 | PKH_144260 | Ubiquitin-activating enzyme e1, putative (1152 aa) |
|
0.696 | ||||||||||
 | PKH_121970 | ThiF family protein, putative (1603 aa) |
|
0.618 | ||||||||||
 | PKH_041150 | Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity) (137 aa) |
|
0.611 | ||||||||||
 | PKH_110530 | UBA/THIF-type NAD/FAD binding protein, putative (536 aa) |
|
0.596 | ||||||||||
 | PKH_145560 | Ubiquitin activating enzyme, putative (635 aa) |
|
0.595 | ||||||||||
 | PKH_100740 | Ubiquitin fusion degradation protein UFD1,putative (661 aa) |
|
0.584 | ||||||||||
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5850
Other names: P. knowlesi, Plasmodium knowlesi
Other names: P. knowlesi, Plasmodium knowlesi
Share
