Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PKH_144360 | Putative uncharacterized protein (402 aa) | ||||||||||||
Predicted Functional Partners:
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 | PKH_133490 | ATPase, putative (1133 aa) |
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0.953 | |||||||||
 | PKH_113000 | Cell division cycle protein 48 homologue,putative (822 aa) |
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0.953 | |||||||||
 | PKH_010920 | Cell division cycle ATPase, putative (1132 aa) |
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0.953 | |||||||||
 | PKH_081120 | Dna repair protein rad23, putative (403 aa) |
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0.813 | |||||||||
 | PKH_050430 | Ubiquitination-mediated degradation component,putative (1231 aa) |
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0.798 | |||||||||
 | PKH_010580 | Erythrocyte membrane protein, putative (994 aa) |
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0.746 | |||||||||
 | PKH_110240 | Proteasome regulatory subunit, putative (311 aa) |
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0.633 | |||||||||
 | PKH_124560 | Ubiquitin carboxyl-terminal hydrolase, putative (228 aa) |
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0.628 | ||||||||||
 | PKH_091450 | Ubiquitin c-terminal hydrolase, family 1,putative (451 aa) |
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0.596 | |||||||||
 | PKH_132810 | Mannose-1-phosphate guanyltransferase, putative (434 aa) |
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0.595 | ||||||||||
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5850
Other names: P. knowlesi, Plasmodium knowlesi
Other names: P. knowlesi, Plasmodium knowlesi
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