Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | PVX_001860 | microtubule-associated protein 1 light chain 3 (124 aa) | ||||||||||||
Predicted Functional Partners:
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 | PVX_098725 | Autophagocytosis associated protein, C-terminal domain containing protein (317 aa) |
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0.998 | ||||||||
 | PV1H14070c | PV1H14070_P (785 aa) |
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0.968 | ||||||||
 | PVX_122000 | vesicle-associated membrane protein 714 (208 aa) |
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0.936 | |||||||||
 | PVX_087090 | aspartyl aminopeptidase (554 aa) |
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0.811 | ||||||||
 | PVX_080480 | phosphatidylinositol 3-kinase (1779 aa) |
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0.783 | |||||||||
 | PVX_098605 | small GTPase Rab7 (206 aa) |
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0.780 | ||||||||
 | PVX_114095 | cell division cycle protein 48 homologue (822 aa) |
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0.762 | |||||||||
 | PVX_088085 | cell division cycle ATPase (1089 aa) |
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0.762 | |||||||||
 | PVX_085820 | AAA family ATPase (1186 aa) |
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0.762 | |||||||||
 | PVX_117590 | K12196 vacuolar protein-sorting-associated protein 4 (419 aa) |
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0.702 | ||||||||||
Your Current Organism:
Plasmodium vivax
NCBI taxonomy Id: 5855
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
