PVX_091095 protein (Plasmodium vivax)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PVX_091095

casein kinase II, alpha subunit (335 aa)

Predicted Functional Partners:

PVX_118420

0.995

PVX_084855

0.993

PVX_090870

0.983

PVX_083020

0.983

PVX_122755

0.960

PVX_084230

0.953

PVX_123745

0.907

PVX_082385

0.906

PVX_114760

0.903

PVX_094855

0.903

Your Current Organism:

Plasmodium vivax

NCBI taxonomy Id: 5855
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
PVX_082385	PVX_091095	NAD-dependent deacetylase; NAD-dependent protein deacylase. Catalyzes the NAD- dependent hydrolysis of acyl groups from lysine residues. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo (By similarity)	casein kinase II, alpha subunit	0.906
PVX_083020	PVX_084855	casein kinase II beta chain	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	0.785
PVX_083020	PVX_091095	casein kinase II beta chain	casein kinase II, alpha subunit	0.983
PVX_083020	PVX_118420	casein kinase II beta chain	structure specific recognition protein	0.808
PVX_083020	PVX_122755	casein kinase II beta chain	translocation protein SEC63	0.879
PVX_084230	PVX_091095	nucleosome assembly protein 1	casein kinase II, alpha subunit	0.953
PVX_084855	PVX_083020	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	casein kinase II beta chain	0.785
PVX_084855	PVX_090870	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	casein kinase II beta chain	0.785
PVX_084855	PVX_091095	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	casein kinase II, alpha subunit	0.993
PVX_084855	PVX_118420	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	structure specific recognition protein	0.604
PVX_084855	PVX_123745	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	endoplasmin precursor	0.790
PVX_090870	PVX_084855	casein kinase II beta chain	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	0.785
PVX_090870	PVX_091095	casein kinase II beta chain	casein kinase II, alpha subunit	0.983
PVX_090870	PVX_118420	casein kinase II beta chain	structure specific recognition protein	0.808
PVX_090870	PVX_122755	casein kinase II beta chain	translocation protein SEC63	0.879
PVX_091095	PVX_082385	casein kinase II, alpha subunit	NAD-dependent deacetylase; NAD-dependent protein deacylase. Catalyzes the NAD- dependent hydrolysis of acyl groups from lysine residues. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo (By similarity)	0.906
PVX_091095	PVX_083020	casein kinase II, alpha subunit	casein kinase II beta chain	0.983
PVX_091095	PVX_084230	casein kinase II, alpha subunit	nucleosome assembly protein 1	0.953
PVX_091095	PVX_084855	casein kinase II, alpha subunit	DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity)	0.993
PVX_091095	PVX_090870	casein kinase II, alpha subunit	casein kinase II beta chain	0.983

page 1 of 3

Experiments

Neighborhood

Databases

Cooccurrence

Textmining

Fusion

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About