Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
|
Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
|||||
 | PVX_093605 | serine/threonine protein phosphatase 2b (catalytic subunit) (564 aa) | ||||||||||||
Predicted Functional Partners:
| ||||||||||||||
 | PVX_117895 | calcineurin B subunit isoform 1 (177 aa) |
 |
|
|
|
0.971 | |||||||
 | PVX_122800 | hypothetical protein (856 aa) |
|
|
|
0.953 | ||||||||
 | PVX_122405 | adaptor-related protein complex 1, mu 1 subunit (458 aa) |
|
|
0.927 | |||||||||
 | PVX_091610 | adapter-related protein complex 4 mu 1 subunit (496 aa) |
|
|
0.927 | |||||||||
 | PVX_114275 | ferredoxin--NADP reductase (367 aa) |
|
|
0.924 | |||||||||
 | PVX_099570 | NADPH-cytochrome p450 reductase (746 aa) |
|
|
0.924 | |||||||||
 | PVX_110885 | dynamin protein (750 aa) |
|
|
|
|
0.920 | |||||||
 | PVX_092875 | dynamin-like protein (814 aa) |
|
|
|
|
0.920 | |||||||
 | PVX_087815 | endonuclease/exonuclease/phosphatase domain containing protein (2754 aa) |
|
|
|
0.919 | ||||||||
 | PVX_101180 | ENTH domain containing protein (408 aa) |
|
|
0.912 | |||||||||
Your Current Organism:
Plasmodium vivax
NCBI taxonomy Id: 5855
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
Share
