Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
|
Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
|||||
 | PVX_095200 | hypothetical protein (186 aa) | ||||||||||||
Predicted Functional Partners:
| ||||||||||||||
 | PVX_124130 | hypothetical protein (718 aa) |
 |
0.788 | ||||||||||
 | PVX_084750 | hypothetical protein (866 aa) |
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0.771 | ||||||||||
 | PVX_079825 | F-actin capping protein, alpha subunit (331 aa) |
|
0.642 | ||||||||||
 | PVX_079820 | hypothetical protein (102 aa) |
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0.642 | ||||||||||
Your Current Organism:
Plasmodium vivax
NCBI taxonomy Id: 5855
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
Other names: P. vivax, Plasmodium vivax, malaria parasite P. vivax
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