Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
|
Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
|||||
 | Chro.10044 | hypothetical protein (397 aa) | ||||||||||||
Predicted Functional Partners:
| ||||||||||||||
 | Chro.10310 | hypothetical protein (628 aa) |
 |
|
0.948 | |||||||||
 | Chro.10043 | cell division cycle protein 48 (814 aa) |
|
|
0.948 | |||||||||
 | Chro.40196 | ATPases of the AAA+ class (297 aa) |
|
|
0.948 | |||||||||
 | Chro.10249 | vesicle transfer ATPase -related (389 aa) |
|
|
0.948 | |||||||||
 | Chro.70524 | RAD 23B protein (341 aa) |
|
|
0.766 | |||||||||
 | Chro.30281 | hypothetical protein (882 aa) |
|
|
0.763 | |||||||||
 | Chro.60380 | Mov34/MPN/PAD-1 family proteasome regulatory subunit (315 aa) |
|
|
0.725 | |||||||||
 | Chro.80372 | ubiquitin carboxy-terminal hydrolase L1 (255 aa) |
|
0.720 | ||||||||||
 | Chro.70023 | sortilin (1006 aa) |
|
0.708 | ||||||||||
 | Chro.20192 | GDP-mannose pyrophosphorylase (4N40) (425 aa) |
|
0.708 | ||||||||||
Your Current Organism:
Cryptosporidium hominis
NCBI taxonomy Id: 353151
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
