Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | Chro.30259 | hypothetical protein (384 aa) | ||||||||||||
Predicted Functional Partners:
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 | Chro.70524 | RAD 23B protein (341 aa) |
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0.992 | |||||||||
 | Chro.50123 | ubiquitin B (229 aa) |
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0.984 | |||||||||
 | Chro.80073 | 26S proteasome regulatory subunit S2 (RPN1) (1038 aa) |
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0.981 | |||||||||
 | Chro.40069 | 26S proteasome regulatory subunit S5A (383 aa) |
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0.966 | |||||||||
 | Chro.40266 | required with RAD23 for duplication of the spindle pole body (354 aa) |
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0.951 | |||||||||
 | Chro.20126 | syntaxin (322 aa) |
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0.924 | |||||||||
 | Chro.70260 | ubiquitin / ribosomal protein CEP52 (128 aa) |
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0.922 | |||||||||
 | Chro.70562 | suppressor of NosA (537 aa) |
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0.808 | ||||||||||
 | Chro.50345 | hypothetical protein (240 aa) |
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0.749 | ||||||||
 | Chro.80616 | methylated-dna--protein-cysteine methyltransferase (6-o-methylguanine-dna methyltransferase) (o-6-methylguanine-dna-alkyltransferase) (213 aa) |
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0.735 | ||||||||||
Your Current Organism:
Cryptosporidium hominis
NCBI taxonomy Id: 353151
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
