Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | Chro.50138 | hypothetical protein (322 aa) | ||||||||||||
Predicted Functional Partners:
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 | Chro.20298 | Coenzyme Q3, methyltransferase (306 aa) |
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0.917 | ||||||||
 | Chro.10320 | hypothetical protein (221 aa) |
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0.799 | |||||||
 | Chro.30116 | flavoprotein (112 aa) |
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0.608 | |||||||||
 | Chro.40256 | ENSANGP00000013327 (308 aa) |
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0.596 | ||||||||||
 | Chro.70577 | deoxyuridine 5’-triphosphate nucleotidohydrolase (176 aa) |
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0.580 | ||||||||||
 | Chro.10049 | ubiquinone biosynthesis protein COQ4 (Coenzyme Q biosynthesis protein 4 ) (CGI-92); Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides (By similarity) (155 aa) |
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0.483 | |||||||||
 | Chro.70224 | hypothetical protein (189 aa) |
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0.456 | |||||||||
 | Chro.80315 | hypothetical protein (482 aa) |
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0.453 | |||||||||
Your Current Organism:
Cryptosporidium hominis
NCBI taxonomy Id: 353151
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
Other names: C. hominis TU502, Cryptosporidium hominis, Cryptosporidium hominis TU502, Cryptosporidium hominis strain TU502
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