Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | EHI_011890 | Peptidase, C54 family (359 aa) | ||||||||||||
Predicted Functional Partners:
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 | EHI_194330 | Autophagy-related protein 3 (268 aa) |
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0.990 | |||||||||
 | EHI_168210 | Protein kinase domain containing protein (584 aa) |
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0.924 | |||||||||
 | EHI_064700 | Autophagy protein apg7, putative (581 aa) |
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0.922 | |||||||||
 | EHI_197280 | Protein kinase domain containing protein (518 aa) |
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0.922 | |||||||||
 | EHI_181260 | Protein kinase domain containing protein (600 aa) |
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0.922 | |||||||||
 | EHI_179890 | Protein kinase domain containing protein (562 aa) |
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0.922 | |||||||||
 | EHI_167640 | Protein kinase domain containing protein (611 aa) |
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0.922 | |||||||||
 | EHI_162340 | Serine/threonine kinase 3, putative (607 aa) |
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0.922 | |||||||||
 | EHI_138550 | Protein kinase domain containing protein (512 aa) |
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0.922 | |||||||||
 | EHI_125850 | Protein kinase domain containing protein (691 aa) |
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0.922 | |||||||||
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica, Entamoeba histolytica
Other names: E. histolytica, Entamoeba histolytica
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