EHI_028920 protein (Entamoeba histolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

EHI_028920

Heat shock protein, putative (866 aa)

Predicted Functional Partners:

EHI_137670

0.990

EHI_197860

0.989

EHI_135750

0.989

EHI_198320

0.987

EHI_192510

0.987

EHI_192440

0.987

EHI_034960

0.987

EHI_026590

0.987

EHI_185120

0.987

EHI_180380

0.987

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica, Entamoeba histolytica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHI_026590	EHI_028920	rna_EHI_185420-1	rna_EHI_028920-1	Heat shock protein 70, putative	Heat shock protein, putative	0.987
EHI_026590	EHI_135750	rna_EHI_185420-1	rna_EHI_135750-1	Heat shock protein 70, putative	Heat shock protein, putative	0.909
EHI_026590	EHI_137670	rna_EHI_185420-1	rna_EHI_137670-1	Heat shock protein 70, putative	Heat shock protein 70, putative	0.582
EHI_026590	EHI_197860	rna_EHI_185420-1	rna_EHI_197860-1	Heat shock protein 70, putative	Heat shock protein 70, putative	0.522
EHI_028920	EHI_026590	rna_EHI_028920-1	rna_EHI_185420-1	Heat shock protein, putative	Heat shock protein 70, putative	0.987
EHI_028920	EHI_034960	rna_EHI_028920-1	rna_EHI_188610-1	Heat shock protein, putative	Heat shock protein 70, putative	0.987
EHI_028920	EHI_135750	rna_EHI_028920-1	rna_EHI_135750-1	Heat shock protein, putative	Heat shock protein, putative	0.989
EHI_028920	EHI_137670	rna_EHI_028920-1	rna_EHI_137670-1	Heat shock protein, putative	Heat shock protein 70, putative	0.990
EHI_028920	EHI_180380	rna_EHI_028920-1	rna_EHI_180380-1	Heat shock protein, putative	Heat shock protein 70, putative	0.987
EHI_028920	EHI_185120	rna_EHI_028920-1	rna_EHI_185120-1	Heat shock protein, putative	Heat shock protein 70, putative	0.987
EHI_028920	EHI_192440	rna_EHI_028920-1	rna_EHI_192440-1	Heat shock protein, putative	Heat shock protein70, hsp70A2, putative	0.987
EHI_028920	EHI_192510	rna_EHI_028920-1	rna_EHI_192510-1	Heat shock protein, putative	Putative uncharacterized protein	0.987
EHI_028920	EHI_197860	rna_EHI_028920-1	rna_EHI_197860-1	Heat shock protein, putative	Heat shock protein 70, putative	0.989
EHI_028920	EHI_198320	rna_EHI_028920-1	rna_EHI_198320-1	Heat shock protein, putative	Heat shock protein 70, putative	0.987
EHI_034960	EHI_028920	rna_EHI_188610-1	rna_EHI_028920-1	Heat shock protein 70, putative	Heat shock protein, putative	0.987
EHI_034960	EHI_135750	rna_EHI_188610-1	rna_EHI_135750-1	Heat shock protein 70, putative	Heat shock protein, putative	0.909
EHI_034960	EHI_137670	rna_EHI_188610-1	rna_EHI_137670-1	Heat shock protein 70, putative	Heat shock protein 70, putative	0.587
EHI_034960	EHI_197860	rna_EHI_188610-1	rna_EHI_197860-1	Heat shock protein 70, putative	Heat shock protein 70, putative	0.557
EHI_135750	EHI_026590	rna_EHI_135750-1	rna_EHI_185420-1	Heat shock protein, putative	Heat shock protein 70, putative	0.909
EHI_135750	EHI_028920	rna_EHI_135750-1	rna_EHI_028920-1	Heat shock protein, putative	Heat shock protein, putative	0.989

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Experiments

Neighborhood

Textmining

Cooccurrence

Coexpression

Fusion

Databases