TA05950 protein (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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[Homology]

Score

TA05950

26S proteasome subunit 4 (438 aa)

Predicted Functional Partners:

TA06255

0.999

TA08435

0.999

TA09310

0.999

TA14975

0.999

TA21405

0.999

TA08080

0.999

TA15700

0.999

TA17225

0.999

TA07380

0.999

TA11850

0.999

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 353154
Other names: T. annulata, T. annulata strain Ankara, Theileria annulata, Theileria annulata Ankara clone C9, Theileria annulata strain Ankara

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA05950	TA06255	XP_953936.1	XP_954069.1	26S proteasome subunit 4	26S proteasome subunit	0.999
TA05950	TA07380	XP_953936.1	XP_952908.1	26S proteasome subunit 4	26S proteasome (regulatory) subunit	0.999
TA05950	TA08080	XP_953936.1	XP_953035.1	26S proteasome subunit 4	hypothetical protein	0.999
TA05950	TA08435	XP_953936.1	XP_953101.1	26S proteasome subunit 4	hypothetical protein	0.999
TA05950	TA09310	XP_953936.1	XP_952831.1	26S proteasome subunit 4	26S proteasome ATPase subunit	0.999
TA05950	TA11850	XP_953936.1	XP_952520.1	26S proteasome subunit 4	proteasome regulatory subunit	0.999
TA05950	TA14975	XP_953936.1	XP_951954.1	26S proteasome subunit 4	26S proteasome non-ATPase regulatory subunit 12	0.999
TA05950	TA15700	XP_953936.1	XP_951822.1	26S proteasome subunit 4	26S proteasome ATPase subunit (Rpt6A homologue)	0.999
TA05950	TA17225	XP_953936.1	XP_952725.1	26S proteasome subunit 4	26s protease regulatory subunit	0.999
TA05950	TA21405	XP_953936.1	XP_954440.1	26S proteasome subunit 4	226S proteasome regulatory particle	0.999
TA06255	TA05950	XP_954069.1	XP_953936.1	26S proteasome subunit	26S proteasome subunit 4	0.999
TA06255	TA07380	XP_954069.1	XP_952908.1	26S proteasome subunit	26S proteasome (regulatory) subunit	0.999
TA06255	TA08080	XP_954069.1	XP_953035.1	26S proteasome subunit	hypothetical protein	0.999
TA06255	TA08435	XP_954069.1	XP_953101.1	26S proteasome subunit	hypothetical protein	0.999
TA06255	TA09310	XP_954069.1	XP_952831.1	26S proteasome subunit	26S proteasome ATPase subunit	0.999
TA06255	TA11850	XP_954069.1	XP_952520.1	26S proteasome subunit	proteasome regulatory subunit	0.999
TA06255	TA14975	XP_954069.1	XP_951954.1	26S proteasome subunit	26S proteasome non-ATPase regulatory subunit 12	0.999
TA06255	TA15700	XP_954069.1	XP_951822.1	26S proteasome subunit	26S proteasome ATPase subunit (Rpt6A homologue)	0.999
TA06255	TA17225	XP_954069.1	XP_952725.1	26S proteasome subunit	26s protease regulatory subunit	0.999
TA06255	TA21405	XP_954069.1	XP_954440.1	26S proteasome subunit	226S proteasome regulatory particle	0.999

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Experiments

Cooccurrence

Databases

Neighborhood

Textmining

Fusion

Coexpression