Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | cgd1_220 | glycosyl transferase (426 aa) | ||||||||||||
Predicted Functional Partners:
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 | cgd5_1850 | GPI1/PIG-Q like N-acetylglucosaminyl-phosphatidylinositol transferase involved in GIP anchor biosynthesis (670 aa) |
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0.889 | |||||||||
 | cgd3_3590 | dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase involved in GPI anchor biosynthesis (637 aa) |
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0.885 | |||||||||
 | cgd5_2040 | dolichol phosphate mannose synthase (242 aa) |
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0.883 | |||||||||
 | cgd1_3720 | PIG-M mannosyltransferase,8 transmembrane domain (420 aa) |
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0.881 | |||||||||
 | cgd7_700 | N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (175 aa) |
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0.875 | ||||||||||
 | cgd8_2260 | phosphatidylinositol glycan class O, integral membrane protein with signal peptide sequence and 12 or more transmembrane domains (1054 aa) |
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0.874 | ||||||||
 | 1MB.770 | multi-pass transmembrane protein (440 aa) |
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0.820 | |||||||||
 | saIC5 | LPS glycosyltransferase of possible cyanobacterial origin (2069 aa) |
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0.813 | ||||||||||
 | cgd4_2100 | PIG-A like N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (451 aa) |
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0.813 | ||||||||||
 | cgd2_550 | hypothetical protein (244 aa) |
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0.794 | ||||||||||
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
Other names: C. parvum Iowa II, Cryptosporidium parvum, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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