cgd3_980 protein (Cryptosporidium parvum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

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query proteins and first shell of interactors

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

cgd3_980

hypothetical protein (210 aa)

Predicted Functional Partners:

cgd1_870

0.535

cgd8_1560

0.535

cgd8_2350

0.535

cgd5_3350

0.535

cgd2_4120

0.535

Cyp

0.535

cgd2_700

0.532

cgd5_2560

0.532

cgd2_3400

0.512

cgd1_580

0.512

Your Current Organism:

Cryptosporidium parvum

NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cyp	cgd3_980	XP_001388204.1	XP_001388097.1	cyclophilin-like protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity)	hypothetical protein	0.535
cgd1_580	cgd3_980	XP_001388141.1	XP_001388097.1	dynamin-like protein	hypothetical protein	0.512
cgd1_870	cgd3_980	XP_627935.1	XP_001388097.1	cyclophilin like peptidyl-prolyl cis-trans isomerase, signal peptide; PPIases accelerate the folding of proteins (By similarity)	hypothetical protein	0.535
cgd2_3400	cgd3_980	XP_001388234.1	XP_001388097.1	dynamin-related protein	hypothetical protein	0.512
cgd2_4120	cgd3_980	XP_001388243.1	XP_001388097.1	20k cyclophilin; PPIases accelerate the folding of proteins (By similarity)	hypothetical protein	0.535
cgd2_700	cgd3_980	XP_626305.1	XP_001388097.1	PMS1’MutL family ATpase’	hypothetical protein	0.532
cgd2_700	cgd5_2560	XP_626305.1	XP_626193.1	PMS1’MutL family ATpase’	MutL family ATpase	0.994
cgd3_980	Cyp	XP_001388097.1	XP_001388204.1	hypothetical protein	cyclophilin-like protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity)	0.535
cgd3_980	cgd1_580	XP_001388097.1	XP_001388141.1	hypothetical protein	dynamin-like protein	0.512
cgd3_980	cgd1_870	XP_001388097.1	XP_627935.1	hypothetical protein	cyclophilin like peptidyl-prolyl cis-trans isomerase, signal peptide; PPIases accelerate the folding of proteins (By similarity)	0.535
cgd3_980	cgd2_3400	XP_001388097.1	XP_001388234.1	hypothetical protein	dynamin-related protein	0.512
cgd3_980	cgd2_4120	XP_001388097.1	XP_001388243.1	hypothetical protein	20k cyclophilin; PPIases accelerate the folding of proteins (By similarity)	0.535
cgd3_980	cgd2_700	XP_001388097.1	XP_626305.1	hypothetical protein	PMS1’MutL family ATpase’	0.532
cgd3_980	cgd5_2560	XP_001388097.1	XP_626193.1	hypothetical protein	MutL family ATpase	0.532
cgd3_980	cgd5_3350	XP_001388097.1	XP_001388285.1	hypothetical protein	hypothetical protein; PPIases accelerate the folding of proteins (By similarity)	0.535
cgd3_980	cgd8_1560	XP_001388097.1	XP_627063.1	hypothetical protein	cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity)	0.535
cgd3_980	cgd8_2350	XP_001388097.1	XP_001388428.1	hypothetical protein	cyclophilin-RNA interacting protein	0.535
cgd5_2560	cgd2_700	XP_626193.1	XP_626305.1	MutL family ATpase	PMS1’MutL family ATpase’	0.994
cgd5_2560	cgd3_980	XP_626193.1	XP_001388097.1	MutL family ATpase	hypothetical protein	0.532
cgd5_3350	cgd3_980	XP_001388285.1	XP_001388097.1	hypothetical protein; PPIases accelerate the folding of proteins (By similarity)	hypothetical protein	0.535

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Experiments

Neighborhood

Databases

Cooccurrence

Textmining

Fusion

Coexpression