Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
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 | REXO1 | REX1, RNA exonuclease 1 homolog (S. cerevisiae); Seems to have no detectable effect on transcription elongation in vitro (1221 aa) | ||
 | TRMT6 | tRNA methyltransferase 6 homolog (S. cerevisiae); Substrate-binding subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (497 aa) | ||
 | HARS2 | histidyl-tRNA synthetase 2, mitochondrial (506 aa) | ||
 | SSB | Sjogren syndrome antigen B (autoantigen La); Binds to the 3’ poly(U) terminii of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation (408 aa) | ||
 | LOC81691 | Putative RNA exonuclease NEF-sp (774 aa) | ||
 | EIF2AK4 | eukaryotic translation initiation factor 2 alpha kinase 4 (1649 aa) | ||
 | EIF2B2 | eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa; Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP (351 aa) | ||
 | SLC39A3 | solute carrier family 39 (zinc transporter), member 3; Acts as a zinc-influx transporter (Potential) (314 aa) | ||
 | ACAA2 | acetyl-CoA acyltransferase 2; Abolishes BNIP3-mediated apoptosis and mitochondrial damage (397 aa) | ||
 | TRMT61B | tRNA methyltransferase 61 homolog B (S. cerevisiae); Methyltransferase that catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in various tRNAs in mitochondrion, including tRNA(Leu) (decephering codons UUA or UUG), tRNA(Lys) and tRNA(Ser) (decephering codons UCA, UCU, UCG or UCC) (477 aa) | ||
 | RHOD | ras homolog family member D; Involved in endosome dynamics. May coordinate membrane transport with the function of the cytoskeleton. Participates in reorganization of actin cytoskeleton (By similarity) (210 aa) | ||
 | LARP7 | La ribonucleoprotein domain family, member 7; Negative transcriptional regulator of polymerase II genes, acting by means of the 7SK RNP system. Within the 7SK RNP complex, the positive transcription elongation factor b (P-TEFb) is sequestered in an inactive form, preventing RNA polymerase II phosphorylation and subsequent transcriptional elongation (582 aa) | ||
 | METTL1 | methyltransferase like 1; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (276 aa) | ||
 | LARP1B | La ribonucleoprotein domain family, member 1B (914 aa) | ||
 | IRF7 | interferon regulatory factor 7; Key transcriptional regulator of type I interferon (IFN)-dependent immune responses and plays a critical role in the innate immune response against DNA and RNA viruses. Regulates the transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters. Can efficiently activate both the IFN-beta (IFNB) and the IFN-alpha (IFNA) genes and mediate their induction via both the virus-activated, MyD88- independent pathway and the TLR-activated, MyD88-dependent [...] (516 aa) | ||
 | POLR3C | polymerase (RNA) III (DNA directed) polypeptide C (62kD) (534 aa) | ||
 | LARP1 | La ribonucleoprotein domain family, member 1 (1019 aa) | ||
 | PPTC7 | PTC7 protein phosphatase homolog (S. cerevisiae) (304 aa) | ||
 | PPIE | peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity) (314 aa) | ||
 | UBXN11 | UBX domain protein 11 (520 aa) | ||
 | REXO1L1 | REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1 (675 aa) | ||
 | TRMT61A | tRNA methyltransferase 61 homolog A (S. cerevisiae); Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (289 aa) | ||
 | TRIM10 | tripartite motif containing 10 (481 aa) | ||
 | EIF2B1 | eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa; Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP (305 aa) | ||
 | HARS | histidyl-tRNA synthetase (509 aa) | ||
 | REXO1L10P | REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 10, pseudogene (675 aa) | ||
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Other names: H. sapiens, Homo, Homo sapiens, human, man
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