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RPS16 | ribosomal protein S16 (146 aa) | |||
RPL35 | ribosomal protein L35 (123 aa) | |||
UPF1 | UPF1 regulator of nonsense transcripts homolog (yeast); RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. Recruited by release factors to stalled ribosomes together with the SMG1C protein kinase complex to form the transient SURF (SMG1-UPF1-eRF1- eRF3) complex. In EJC-dependent NMD, the SURF complex associates with the exon junction complex (EJC) (loc [...] (1118 aa) | |||
RPL3L | ribosomal protein L3-like (407 aa) | |||
RPL37 | ribosomal protein L37; Binds to the 23S rRNA (By similarity) (97 aa) | |||
UPF3B | UPF3 regulator of nonsense transcripts homolog B (yeast); Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2- UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. In cooperation with UPF2 stimulates both ATPase and RNA helicase activities of UPF1. Binds spliced mR [...] (483 aa) | |||
RPL30 | ribosomal protein L30 (115 aa) | |||
RPS23 | ribosomal protein S23 (143 aa) | |||
RNPS1 | RNA binding protein S1, serine-rich domain (305 aa) | |||
RPLP2 | ribosomal protein, large, P2; Plays an important role in the elongation step of protein synthesis (115 aa) | |||
RPL7 | ribosomal protein L7; Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (248 aa) | |||
RPS2 | ribosomal protein S2 (293 aa) | |||
RPS21 | ribosomal protein S21 (83 aa) | |||
UPF2 | UPF2 regulator of nonsense transcripts homolog (yeast) (1272 aa) | |||
SMG5 | smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans); Plays a role in nonsense-mediated mRNA decay. Does not have RNase activity by itself. Promotes dephosphorylation of UPF1. Together with SMG7 is thought to provide a link to the mRNA degradation machinery involving exonucleolytic pathways, and to serve as an adapter for UPF1 to protein phosphatase 2A (PP2A), thereby triggering UPF1 dephosphorylation. Necessary for TERT activity (1016 aa) | |||
RPL10A | ribosomal protein L10a (217 aa) | |||
UPF3A | UPF3 regulator of nonsense transcripts homolog A (yeast); Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2- UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. However, UPF3A is shown to be only marginally active in NMD as compared to UPF3B. Binds spliced mRNA [...] (476 aa) | |||
RPL23 | ribosomal protein L23 (140 aa) | |||
RPL34 | ribosomal protein L34 (117 aa) | |||
RPL35A | ribosomal protein L35a; Required for the proliferation and viability of hematopoietic cells. Plays a role in 60S ribosomal subunit formation. The protein was found to bind to both initiator and elongator tRNAs and consequently was assigned to the P site or P and A site (110 aa) | |||
SMG1 | smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans); Serine/threonine protein kinase involved in both mRNA surveillance and genotoxic stress response pathways. Recognizes the substrate consensus sequence [ST]-Q. Plays a central role in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating UPF1/RENT1. Recruited by release factors to stalled ribosomes together with SMG8 and SMG9 (forming the SMG1C protein kinase complex), and UPF1 to form the transient SURF (SMG1-UPF1-eRF1-eRF3) complex. In EJC-dependent NMD, the SURF complex asso [...] (3661 aa) | |||
61E3.4 | Putative NPIP-like protein LOC613037 (1138 aa) | |||
RPS3 | ribosomal protein S3 (243 aa) | |||
RPL18 | ribosomal protein L18 (188 aa) | |||
RPL17 | ribosomal protein L17 (184 aa) | |||
RPS28 | ribosomal protein S28 (69 aa) |