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STRINGSTRING
RRP7A RRP7A RPS23 RPS23 RPS9 RPS9 RCL1 RCL1 RPS27A RPS27A RPS27 RPS27 DDX49 DDX49 RPS4X RPS4X RRP9 RRP9 RPS27L RPS27L RPS4Y2 RPS4Y2 WDR43 WDR43 RPS5 RPS5 WDR3 WDR3 RPS13 RPS13 RPS3A RPS3A RPS24 RPS24 UTP3 UTP3 RPS3 RPS3 DIEXF DIEXF RPS16 RPS16 RPS11 RPS11 LTV1 LTV1 RPP40 RPP40 RIOK1 RIOK1 RPP21 RPP21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
RPS5ribosomal protein S5 (204 aa)
RRP9ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast); Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (475 aa)
DDX49DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 (483 aa)
RPS16ribosomal protein S16 (146 aa)
UTP3UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae); Essential for gene silencing- has a role in the structure of silenced chromatin. Plays a role in the developing brain (By similarity) (479 aa)
RPS11ribosomal protein S11 (158 aa)
RPS27Aribosomal protein S27a (156 aa)
RPS4Y2ribosomal protein S4, Y-linked 2 (263 aa)
RPS23ribosomal protein S23 (143 aa)
RPS9ribosomal protein S9 (194 aa)
WDR3WD repeat domain 3 (943 aa)
RRP7Aribosomal RNA processing 7 homolog A (S. cerevisiae) (280 aa)
RPS27Lribosomal protein S27-like (84 aa)
RPS3Aribosomal protein S3A; May play a role during erythropoiesis through regulation of transcription factor DDIT3 (By similarity) (264 aa)
LTV1LTV1 homolog (S. cerevisiae) (475 aa)
RPS27ribosomal protein S27 (84 aa)
RPS4Xribosomal protein S4, X-linked (263 aa)
RIOK1RIO kinase 1 (yeast) (568 aa)
RPP40ribonuclease P/MRP 40kDa subunit; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (363 aa)
RCL1RNA terminal phosphate cyclase-like 1; Does not have cyclase activity. Plays a role in 40S- ribosomal-subunit biogenesis in the early pre-rRNA processing steps at sites A0, A1 and A2 that are required for proper maturation of the 18S RNA (By similarity) (373 aa)
WDR43WD repeat domain 43 (677 aa)
RPP21ribonuclease P/MRP 21kDa subunit (162 aa)
RPS24ribosomal protein S24; Required for processing of pre-rRNA and maturation of 40S ribosomal subunits (289 aa)
DIEXFdigestive organ expansion factor homolog (zebrafish); Regulates the p53 pathway to control the expansion growth of digestive organs (By similarity) (756 aa)
RPS3ribosomal protein S3 (243 aa)
RPS13ribosomal protein S13 (151 aa)
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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