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STRINGSTRING
SUFU SUFU UBC UBC YIPF3 YIPF3 YIF1A YIF1A RNF185 RNF185 YIPF4 YIPF4 YIPF2 YIPF2 GTF3A GTF3A YIPF1 YIPF1 YIF1B YIF1B CCR6 CCR6
"YIPF4" - Yip1 domain family, member 4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
YIPF4Yip1 domain family, member 4; Involved in the maintenance of the Golgi structure (244 aa)    
Predicted Functional Partners:
YIPF3
Yip1 domain family, member 3; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (350 aa)
        score_image   score_image   0.985
UBC
ubiquitin C (685 aa)
        score_image       0.893
YIF1B
Yip1 interacting factor homolog B (S. cerevisiae) (314 aa)
            score_image   0.801
GTF3A
general transcription factor IIIA; Interacts with the internal control region (ICR) of approximately 50 bases within the 5S RNA genes, is required for correct transcription of these genes by RNA polymerase III. Also binds the transcribed 5S RNA’s. May initiate transcription of the 5S ribosomal RNA gene and maintain the stability of transcription of other genes (365 aa)
            score_image   0.775
YIF1A
Yip1 interacting factor homolog A (S. cerevisiae); Possible role in transport between endoplasmic reticulum and Golgi (293 aa)
            score_image   0.768
YIPF2
Yip1 domain family, member 2 (316 aa)
            score_image   0.720
YIPF1
Yip1 domain family, member 1 (306 aa)
            score_image   0.720
SUFU
suppressor of fused homolog (Drosophila); Negative regulator in the hedgehog signaling pathway. Down-regulates GLI1-mediated transactivation of target genes. Part of a corepressor complex that acts on DNA-bound GLI1. May also act by linking GLI1 to BTRC and thereby targeting GLI1 to degradation by the proteasome. Sequesters GLI1, GLI2 and GLI3 in the cytoplasm, this effect is overcome by binding of STK36 to both SUFU and a GLI protein. Negative regulator of beta-catenin signaling. Regulates the formation of either the repressor form (GLI3R) or the activator form (GLI3A) of the full len [...] (484 aa)
            score_image   0.508
RNF185
ring finger protein 185; Mitochondrial E3 ubiquitin-protein ligase that regulates selective mitochondrial autophagy by mediating ’Lys-63’-linked polyubiquitination of BNIP1 (192 aa)
        score_image       0.499
CCR6
chemokine (C-C motif) receptor 6; Receptor for a C-C type chemokine. Binds to MIP-3- alpha/LARC and subsequently transduces a signal by increasing the intracellular calcium ions level (374 aa)
            score_image   0.497
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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