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STRINGSTRING
RPL27 RPL27 RPL31 RPL31 RPL14 RPL14 RPL9 RPL9 RPL23 RPL23 RPL18 RPL18 RPL19 RPL19 RPL6 RPL6 RPL4 RPL4 RPL29 RPL29 RPL30 RPL30
"RPL27" - ribosomal protein L27 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL27ribosomal protein L27 (136 aa)    
Predicted Functional Partners:
RPL30
ribosomal protein L30 (115 aa)
      score_image score_image score_image score_image   0.999
RPL23
ribosomal protein L23 (140 aa)
score_image     score_image score_image score_image score_image   0.999
RPL31
ribosomal protein L31 (128 aa)
      score_image score_image score_image score_image   0.999
RPL18
ribosomal protein L18 (188 aa)
      score_image score_image score_image score_image   0.999
RPL14
ribosomal protein L14 (215 aa)
      score_image score_image score_image score_image   0.999
RPL19
ribosomal protein L19 (196 aa)
score_image     score_image score_image score_image score_image   0.999
RPL9
ribosomal protein L9 (192 aa)
score_image     score_image score_image score_image score_image   0.999
RPL4
ribosomal protein L4 (427 aa)
      score_image score_image score_image score_image   0.999
RPL29
ribosomal protein L29 (159 aa)
      score_image score_image score_image score_image   0.999
RPL6
ribosomal protein L6; Specifically binds to domain C of the Tax-responsive enhancer element in the long terminal repeat of HTLV-I (288 aa)
      score_image score_image score_image score_image   0.999
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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