Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
AP5S1 AP5S1 SERTAD3 SERTAD3 AP5B1 AP5B1 AP5Z1 AP5Z1 UBC UBC SPG11 SPG11 SPAST SPAST ZFYVE26 ZFYVE26 CYP7B1 CYP7B1 SEMA6D SEMA6D SPG7 SPG7
"SPG11" - spastic paraplegia 11 (autosomal recessive) in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG11spastic paraplegia 11 (autosomal recessive) (2443 aa)    
Predicted Functional Partners:
AP5Z1
adaptor-related protein complex 5, zeta 1 subunit; As part of AP-5, a probable fifth adapter protein complex it may be involved in endosomal transport. According to PubMed-20613862 it is a putative helicase required for efficient homologous recombination DNA double-strand break repair (807 aa)
            score_image   0.970
ZFYVE26
zinc finger, FYVE domain containing 26 (2539 aa)
      score_image     score_image   0.870
AP5S1
adaptor-related protein complex 5, sigma 1 subunit; As part of AP-5, a probable fifth adapter protein complex it may be involved in endosomal transport. According to PubMed-20613862, it is required for efficient homologous recombination DNA double-strand break repair (200 aa)
            score_image   0.868
AP5B1
adaptor-related protein complex 5, beta 1 subunit; As part of AP-5, a probable fifth adapter protein complex it may be involved in endosomal transport (878 aa)
            score_image   0.860
UBC
ubiquitin C (685 aa)
        score_image       0.849
CYP7B1
cytochrome P450, family 7, subfamily B, polypeptide 1 (506 aa)
            score_image   0.683
SEMA6D
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (1073 aa)
            score_image   0.672
SPG7
spastic paraplegia 7 (pure and complicated autosomal recessive); Putative ATP-dependent zinc metalloprotease (795 aa)
            score_image   0.664
SPAST
spastin; ATP-dependent microtubule severing protein. Microtubule severing may promote reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Golgi and for completion of the abscission stage of cytokinesis. Also plays a role in axon growth and the formation of axonal branches (By similarity) (616 aa)
            score_image   0.645
SERTAD3
SERTA domain containing 3; Strong transcriptional coactivator (196 aa)
        score_image       0.613
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: medium (45%)