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STRINGSTRING
B3GALTL B3GALTL SHOX SHOX ZMYND12 ZMYND12 PTPRN PTPRN WDR31 WDR31 SNX19 SNX19 TMEM2 TMEM2 PACRGL PACRGL CTSB CTSB DHX15 DHX15 C2orf82 C2orf82
"SNX19" - sorting nexin 19 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX19sorting nexin 19; May be involved in several stages of intracellular trafficking (By similarity) (992 aa)    
Predicted Functional Partners:
PACRGL
PARK2 co-regulated-like (221 aa)
            score_image   0.731
PTPRN
protein tyrosine phosphatase, receptor type, N; Implicated in neuroendocrine secretory processes. May be involved in processes specific for neurosecretory granules, such as their biogenesis, trafficking or regulated exocytosis or may have a general role in neuroendocrine functions. Seems to lack intrinsic enzyme activity. May play a role in the regulation of secretory granules via its interaction with SNTB2 (979 aa)
        score_image   score_image   0.572
TMEM2
transmembrane protein 2 (1383 aa)
            score_image   0.493
DHX15
DEAH (Asp-Glu-Ala-His) box polypeptide 15; Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA (By similarity) (795 aa)
            score_image   0.417
WDR31
WD repeat domain 31 (367 aa)
            score_image   0.414
CTSB
cathepsin B; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis (339 aa)
            score_image   0.414
ZMYND12
zinc finger, MYND-type containing 12 (365 aa)
            score_image   0.414
SHOX
short stature homeobox; Controls fundamental aspects of growth and development (292 aa)
            score_image   0.410
C2orf82
chromosome 2 open reading frame 82 (121 aa)
            score_image   0.407
B3GALTL
beta 1,3-galactosyltransferase-like; O-fucosyltransferase that transfers glucose toward fucose with a beta-1,3 linkage. Specifically glucosylates O-linked fucosylglycan on TSP type-1 domains of proteins, thereby contributing to elongation of O-fucosylglycan (498 aa)
            score_image   0.405
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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