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SEPT7L SEPT7L TBL3 TBL3 CCDC144A CCDC144A KPNA6 KPNA6 FAM182B FAM182B FRG1B FRG1B PRKRIP1 PRKRIP1 ZCCHC10 ZCCHC10 CDC40 CDC40 PRPF19 PRPF19 ZCCHC7 ZCCHC7
"FRG1B" - FSHD region gene 1 family, member B in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRG1BFSHD region gene 1 family, member B (182 aa)    
Predicted Functional Partners:
CCDC144A
coiled-coil domain containing 144A (1427 aa)
            score_image   0.702
FAM182B
family with sequence similarity 182, member B (152 aa)
            score_image   0.700
KPNA6
karyopherin alpha 6 (importin alpha 7); Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran- dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alph [...] (536 aa)
        score_image       0.613
CDC40
cell division cycle 40 homolog (S. cerevisiae); Associates with the spliceosome late in the splicing pathway and may function in the second step of pre-mRNA splicing (579 aa)
        score_image       0.523
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae); Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process. Component of the PRP19-CDC5L comple [...] (504 aa)
        score_image       0.523
SEPT7L
septin 7-like (92 aa)
            score_image   0.509
ZCCHC7
zinc finger, CCHC domain containing 7 (543 aa)
            score_image   0.480
TBL3
transducin (beta)-like 3 (808 aa)
            score_image   0.471
ZCCHC10
zinc finger, CCHC domain containing 10 (170 aa)
            score_image   0.461
PRKRIP1
PRKR interacting protein 1 (IL11 inducible); Binds double-stranded RNA. Inhibits EIF2AK2 kinase activity (By similarity) (184 aa)
      score_image     score_image   0.459
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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