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STRINGSTRING
LDB1 LDB1 C19orf55 C19orf55 ARHGAP23 ARHGAP23 LDB2 LDB2 FGD5 FGD5 SH3GL3 SH3GL3 TTC21A TTC21A LRRN1 LRRN1 LRRC3B LRRC3B LRCH4 LRCH4 TOPAZ1 TOPAZ1
"FGD5" - FYVE, RhoGEF and PH domain containing 5 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
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colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
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gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
FGD5FYVE, RhoGEF and PH domain containing 5; Activates CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. Mediates VEGF-induced CDC42 activation. May regulate proangiogenic action of VEGF in vascular endothelial cells, including network formation, directional movement and proliferation. May play a role in regulating the actin cytoskeleton and cell shape (1462 aa)    
Predicted Functional Partners:
TOPAZ1
testis and ovary specific PAZ domain containing 1 (1692 aa)
            score_image   0.649
C19orf55
chromosome 19 open reading frame 55 (479 aa)
            score_image   0.567
LRRC3B
leucine rich repeat containing 3B (259 aa)
            score_image   0.566
ARHGAP23
Rho GTPase activating protein 23; GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state (By similarity) (1491 aa)
            score_image   0.559
LRCH4
leucine-rich repeats and calponin homology (CH) domain containing 4 (683 aa)
            score_image   0.534
LDB2
LIM domain binding 2; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors (373 aa)
            score_image   0.512
LRRN1
leucine rich repeat neuronal 1 (716 aa)
            score_image   0.503
LDB1
LIM domain binding 1; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors. May regulate the transcriptional activity of LIM-containing proteins by determining specific partner interactions. Play a role in the development of interneurons and motor neurons in cooperation with LHX3 and ISL1. Acts synergistically with LHX1/LIM1 in axis formation and activation of gene expression. Acts with LMO2 in the regulation of red blood cell development, maintaining erythroid precursors in an immature state (By similarity) (411 aa)
            score_image   0.465
SH3GL3
SH3-domain GRB2-like 3; Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity) (347 aa)
            score_image   0.465
TTC21A
tetratricopeptide repeat domain 21A (1320 aa)
            score_image   0.450
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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