RSRC1 protein (Homo sapiens) - STRING network view

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RSRC1

arginine/serine-rich coiled-coil 1; Plays a role in pre-mRNA splicing. Involved in both constitutive and alternative pre-mRNA splicing. May have a role in the recognition of the 3’ splice site during the second step of splicing (334 aa)

Predicted Functional Partners:

FAU

0.998

RPS28

0.997

RPS13

0.997

RPS7

0.997

RPS3

0.996

RPS15

0.996

RPS16

0.996

RPS3A

0.996

RPS2

0.995

RPS23

0.995

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAU	RPS13	ENSP00000431822	ENSP00000435777	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S13	0.999
FAU	RPS15	ENSP00000431822	ENSP00000467676	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S15	0.999
FAU	RPS16	ENSP00000431822	ENSP00000251453	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S16	0.999
FAU	RPS2	ENSP00000431822	ENSP00000341885	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S2	0.999
FAU	RPS23	ENSP00000431822	ENSP00000296674	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S23	0.999
FAU	RPS28	ENSP00000431822	ENSP00000472469	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S28	0.999
FAU	RPS3	ENSP00000431822	ENSP00000433821	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S3	0.999
FAU	RPS3A	ENSP00000431822	ENSP00000346050	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S3A; May play a role during erythropoiesis through regulation of transcription factor DDIT3 (By similarity)	0.999
FAU	RPS7	ENSP00000431822	ENSP00000339095	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	ribosomal protein S7; Required for rRNA maturation	0.999
FAU	RSRC1	ENSP00000431822	ENSP00000295930	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	arginine/serine-rich coiled-coil 1; Plays a role in pre-mRNA splicing. Involved in both constitutive and alternative pre-mRNA splicing. May have a role in the recognition of the 3’ splice site during the second step of splicing	0.998
RPS13	FAU	ENSP00000435777	ENSP00000431822	ribosomal protein S13	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	0.999
RPS13	RPS15	ENSP00000435777	ENSP00000467676	ribosomal protein S13	ribosomal protein S15	0.999
RPS13	RPS16	ENSP00000435777	ENSP00000251453	ribosomal protein S13	ribosomal protein S16	0.999
RPS13	RPS2	ENSP00000435777	ENSP00000341885	ribosomal protein S13	ribosomal protein S2	0.999
RPS13	RPS23	ENSP00000435777	ENSP00000296674	ribosomal protein S13	ribosomal protein S23	0.999
RPS13	RPS28	ENSP00000435777	ENSP00000472469	ribosomal protein S13	ribosomal protein S28	0.999
RPS13	RPS3	ENSP00000435777	ENSP00000433821	ribosomal protein S13	ribosomal protein S3	0.999
RPS13	RPS3A	ENSP00000435777	ENSP00000346050	ribosomal protein S13	ribosomal protein S3A; May play a role during erythropoiesis through regulation of transcription factor DDIT3 (By similarity)	0.999
RPS13	RPS7	ENSP00000435777	ENSP00000339095	ribosomal protein S13	ribosomal protein S7; Required for rRNA maturation	0.999
RPS13	RSRC1	ENSP00000435777	ENSP00000295930	ribosomal protein S13	arginine/serine-rich coiled-coil 1; Plays a role in pre-mRNA splicing. Involved in both constitutive and alternative pre-mRNA splicing. May have a role in the recognition of the 3’ splice site during the second step of splicing	0.997

page 1 of 6

Experiments

Neighborhood

Databases

Cooccurrence

Textmining

Fusion

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About