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STRINGSTRING
CHAF1B CHAF1B KCNJ15 KCNJ15 TMEM45B TMEM45B CLDN8 CLDN8 CLDN17 CLDN17 FAM165B FAM165B CHODL CHODL SMYD4 SMYD4 CXADR CXADR COL23A1 COL23A1 RSPO4 RSPO4
"CHODL" - chondrolectin in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
CHODLchondrolectin (273 aa)    
Predicted Functional Partners:
CLDN8
claudin 8; Plays a major role in tight junction-specific obliteration of the intercellular space (By similarity) (225 aa)
            score_image   0.677
CXADR
coxsackie virus and adenovirus receptor; Component of the epithelial apical junction complex that is essential for the tight junction integrity. Proposed to function as a homophilic cell adhesion molecule. Recruits MPDZ to intercellular contact sites. Probably involved in transepithelial migration of polymorphonuclear leukocytes (PMN) through adhesive interactions with AMICA1/JAML located in the plasma membrane of PMN (365 aa)
            score_image   0.566
RSPO4
R-spondin 4; Activator of the beta-catenin signaling cascade, leading to TCF-dependent gene activation. Acts both in the canonical Wnt/beta-catenin-dependent pathway and in non-canonical Wnt signaling pathway, probably by acting as an inhibitor of ZNRF3, an important regulator of the Wnt signaling pathway (By similarity) (234 aa)
            score_image   0.548
CHAF1B
chromatin assembly factor 1, subunit B (p60); Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. CAF-1 performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer (559 aa)
            score_image   0.493
CLDN17
claudin 17; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium- independent cell-adhesion activity (By similarity) (224 aa)
            score_image   0.483
SMYD4
SET and MYND domain containing 4 (804 aa)
            score_image   0.474
TMEM45B
transmembrane protein 45B (275 aa)
            score_image   0.468
KCNJ15
potassium inwardly-rectifying channel, subfamily J, member 15; Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium; as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward rectification is mainly due to the blockage of outward current by internal magnesium (375 aa)
            score_image   0.434
COL23A1
collagen, type XXIII, alpha 1 (540 aa)
            score_image   0.426
FAM165B
family with sequence similarity 165, member B (58 aa)
            score_image   0.405
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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