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STRINGSTRING
LGALS7 LGALS7 HMX2 HMX2 WDR48 WDR48 USP38 USP38 HMX3 HMX3 WDR20 WDR20 DMWD DMWD UBC UBC HSPB1 HSPB1 RPL7 RPL7 RPS12 RPS12
"USP38" - ubiquitin specific peptidase 38 in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
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query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
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Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
USP38ubiquitin specific peptidase 38; Deubiquitinating enzyme exhibiting a preference towards ’Lys-63’-linked Ubiquitin chains (1042 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48 (677 aa)
      score_image score_image   score_image   0.834
UBC
ubiquitin C (685 aa)
        score_image   score_image   0.769
LGALS7
lectin, galactoside-binding, soluble, 7; Could be involved in cell-cell and/or cell-matrix interactions necessary for normal growth control. Pro-apoptotic protein that functions intracellularly upstream of JNK activation and cytochrome c release (136 aa)
        score_image       0.740
HMX3
H6 family homeobox 3; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development. Binds to the 5’-CAAGTG-3’ core sequence. Controls semicircular canal formation in the inner ear. Also required for hypothalamic/pituitary axis of the CNS (By similarity) (357 aa)
        score_image       0.740
HMX2
H6 family homeobox 2; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development (By similarity) (273 aa)
        score_image       0.740
RPL7
ribosomal protein L7; Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (248 aa)
        score_image       0.740
HSPB1
heat shock 27kDa protein 1 (205 aa)
        score_image       0.740
RPS12
ribosomal protein S12 (132 aa)
        score_image       0.740
WDR20
WD repeat domain 20 (600 aa)
        score_image   score_image   0.734
DMWD
dystrophia myotonica, WD repeat containing; Could have a regulatory function in meiosis (674 aa)
        score_image   score_image   0.734
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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