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STRINGSTRING
CDH23 CDH23 DFNB31 DFNB31 LCA5 LCA5 PCDH15 PCDH15 USH1C USH1C PDZD7 PDZD7 NINL NINL CLRN1 CLRN1 USH2A USH2A HLA-G HLA-G KCTD3 KCTD3
"USH2A" - Usher syndrome 2A (autosomal recessive, mild) in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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protein of unknown 3D structure
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query proteins and first shell of interactors
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white nodes:
second shell of interactors
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experimentally determined
Predicted Interactions
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fusion edge
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textmining
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protein homology
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Score
USH2AUsher syndrome 2A (autosomal recessive, mild); Involved in hearing and vision (5202 aa)    
Predicted Functional Partners:
DFNB31
deafness, autosomal recessive 31 (907 aa)
          score_image score_image   0.974
USH1C
Usher syndrome 1C (autosomal recessive, severe); Required for normal development and maintenance of cochlear hair cell bundles. Anchoring/scaffolding protein that is a part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing (By similarity) (899 aa)
            score_image   0.948
NINL
ninein-like; Involved in the microtubule organization in interphase cells. Overexpression induces the fragmentation of the Golgi, and causes lysosomes to disperse toward the cell periphery; it also interferes with mitotic spindle assembly. May play a role in ovarian carcinogenesis (1382 aa)
            score_image   0.947
PDZD7
PDZ domain containing 7 (517 aa)
            score_image   0.912
HLA-G
major histocompatibility complex, class I, G; Involved in the presentation of foreign antigens to the immune system. Plays a role in maternal tolerance of the fetus by mediating protection from the deleterious effects of natural killer cells, cytotoxic T-lymphocytes, macrophages and mononuclear cells (338 aa)
            score_image   0.878
PCDH15
protocadherin-related 15; Calcium-dependent cell-adhesion protein. Essential for maintenance of normal retinal and cochlear function (1957 aa)
            score_image   0.828
CLRN1
clarin 1; May have a role in the excitatory ribbon synapse junctions between hair cells and cochlear ganglion cells and presumably also in analogous synapses within the retina (245 aa)
            score_image   0.811
KCTD3
potassium channel tetramerisation domain containing 3 (815 aa)
            score_image   0.746
CDH23
cadherin-related 23; Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells. CDH23 is required for establishing and/or maintaining the proper organization of the stereocilia bundle of hair cells in the cochlea and the vestibule during late embryonic/early postnatal development. It is part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing (1114 aa)
            score_image   0.730
LCA5
Leber congenital amaurosis 5; Might be involved in minus end-directed microtubule transport (697 aa)
            score_image   0.680
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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