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STRINGSTRING
ENSG00000212857 ENSG00000212857 EIF2A EIF2A C15orf40 C15orf40 LCE1E LCE1E UBC UBC CDC42BPB CDC42BPB KRT16 KRT16 KRT78 KRT78 KIAA1984 KIAA1984 TMEM63C TMEM63C SYCP2L SYCP2L
"KRT78" - keratin 78 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT78keratin 78 (520 aa)    
Predicted Functional Partners:
UBC
ubiquitin C (685 aa)
        score_image   score_image   0.741
KRT16
keratin 16 (473 aa)
            score_image   0.661
CDC42BPB
CDC42 binding protein kinase beta (DMPK-like); Serine/threonine-protein kinase which is an important downstream effector of CDC42 and plays a role in the regulation of cytoskeleton reorganization and cell migration. Regulates actin cytoskeletal reorganization via phosphorylation of PPP1R12C and MYL9/MLC2. In concert with MYO18A and LURAP1, is involved in modulating lamellar actomyosin retrograde flow that is crucial to cell protrusion and migration. Phosphorylates PPP1R12A (1711 aa)
        score_image       0.504
C15orf40
chromosome 15 open reading frame 40 (167 aa)
            score_image   0.499
SYCP2L
synaptonemal complex protein 2-like (812 aa)
            score_image   0.475
ENSG00000212857
Uncharacterized protein DKFZp434B061 (555 aa)
            score_image   0.472
KIAA1984
KIAA1984 (534 aa)
            score_image   0.459
LCE1E
late cornified envelope 1E; Precursors of the cornified envelope of the stratum corneum (118 aa)
            score_image   0.457
EIF2A
eukaryotic translation initiation factor 2A, 65kDa; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF- 2 complex, it binds methionyl-tRNAi to 40 S subunits in a codon- dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40 S subunits in a GTP-dependent manner. May act by impiging the expression of specific proteins (585 aa)
            score_image   0.420
TMEM63C
transmembrane protein 63C (806 aa)
            score_image   0.418
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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