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STRINGSTRING
HIGD1A HIGD1A NUDCD1 NUDCD1 C5orf15 C5orf15 C4orf46 C4orf46 TMEM209 TMEM209 CNEP1R1 CNEP1R1 TIGD2 TIGD2 TMCC1 TMCC1 TMEM230 TMEM230 TSC22D2 TSC22D2 AVPI1 AVPI1
"TIGD2" - tigger transposable element derived 2 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD2tigger transposable element derived 2 (525 aa)    
Predicted Functional Partners:
C4orf46
chromosome 4 open reading frame 46 (113 aa)
            score_image   0.626
CNEP1R1
CTD nuclear envelope phosphatase 1 regulatory subunit 1; Forms with the serine/threonine protein phosphatase CTDNEP1 an active complex which dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid [...] (142 aa)
            score_image   0.566
C5orf15
chromosome 5 open reading frame 15 (265 aa)
            score_image   0.505
TMEM209
transmembrane protein 209 (561 aa)
            score_image   0.504
NUDCD1
NudC domain containing 1 (583 aa)
            score_image   0.487
TMCC1
transmembrane and coiled-coil domain family 1 (653 aa)
            score_image   0.474
HIGD1A
HIG1 hypoxia inducible domain family, member 1A; Proposed subunit of cytochrome c oxidase (COX, complex IV), which is the terminal component of the mitochondrial respiratory chain that catalyzes the reduction of oxygen to water. May play a role in the assembly of respiratory supercomplexes (107 aa)
            score_image   0.471
TSC22D2
TSC22 domain family, member 2 (780 aa)
            score_image   0.465
TMEM230
transmembrane protein 230 (183 aa)
            score_image   0.459
AVPI1
arginine vasopressin-induced 1; May be involved in MAP kinase activation, epithelial sodium channel (ENaC) down-regulation and cell cycling (By similarity) (147 aa)
            score_image   0.457
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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