Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
DNAJC1 DNAJC1 SSR4 SSR4 MAGT1 MAGT1 SSR3 SSR3 SSR2 SSR2 SSR1 SSR1 SEC61A1 SEC61A1 SEC11A SEC11A SEC11C SEC11C TMED10 TMED10 SEC61B SEC61B
"SSR4" - signal sequence receptor, delta in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSR4signal sequence receptor, delta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins (173 aa)    
Predicted Functional Partners:
SSR3
signal sequence receptor, gamma (translocon-associated protein gamma); TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins (185 aa)
      score_image   score_image score_image   0.998
SSR2
signal sequence receptor, beta (translocon-associated protein beta); TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins (183 aa)
      score_image score_image   score_image   0.996
SEC61B
Sec61 beta subunit; Necessary for protein translocation in the endoplasmic reticulum (96 aa)
      score_image     score_image   0.976
SSR1
signal sequence receptor, alpha (286 aa)
      score_image     score_image   0.918
SEC11A
SEC11 homolog A (S. cerevisiae); Component of the microsomal signal peptidase complex which removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (By similarity) (179 aa)
      score_image     score_image   0.856
SEC11C
SEC11 homolog C (S. cerevisiae); Component of the microsomal signal peptidase complex which removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (By similarity) (192 aa)
      score_image     score_image   0.832
TMED10
transmembrane emp24-like trafficking protein 10 (yeast); Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED2 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipi [...] (219 aa)
      score_image     score_image   0.754
SEC61A1
Sec61 alpha 1 subunit (S. cerevisiae) (476 aa)
      score_image     score_image   0.719
DNAJC1
DnaJ (Hsp40) homolog, subfamily C, member 1; May modulate protein synthesis (By similarity) (554 aa)
            score_image   0.689
MAGT1
magnesium transporter 1; May be involved in N-glycosylation through its association with N-oligosaccharyl transferase. May be involved in Mg(2+) transport in epithelial cells (367 aa)
      score_image         0.689
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: low (34%)