Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
EBNA1BP2 EBNA1BP2 GNL3 GNL3 ENSG00000248354 ENSG00000248354 NOL6 NOL6 NOC4L NOC4L WDR46 WDR46 CIRH1A CIRH1A PWP2 PWP2 AATF AATF RRP7A RRP7A IMP3 IMP3
"RRP7A" - ribosomal RNA processing 7 homolog A (S. cerevisiae) in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7Aribosomal RNA processing 7 homolog A (S. cerevisiae) (280 aa)    
Predicted Functional Partners:
NOL6
nucleolar protein family 6 (RNA-associated) (1146 aa)
      score_image score_image   score_image   0.980
NOC4L
nucleolar complex associated 4 homolog (S. cerevisiae) (516 aa)
      score_image score_image   score_image   0.938
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (919 aa)
      score_image score_image   score_image   0.913
CIRH1A
cirrhosis, autosomal recessive 1A (cirhin); May be a transcriptional regulator. Acts as a positive regulator of HIVEP1 which specifically binds to the DNA sequence 5’-GGGACTTTCC-3’ found in enhancer elements of numerous viral promoters such as those of HIV-1, SV40, or CMV (686 aa)
      score_image score_image   score_image   0.907
EBNA1BP2
EBNA1 binding protein 2; Required for the processing of the 27S pre-rRNA (By similarity) (361 aa)
      score_image score_image       0.883
ENSG00000248354
Uncharacterized protein (205 aa)
      score_image score_image   score_image   0.846
AATF
apoptosis antagonizing transcription factor; May function as a general inhibitor of the histone deacetylase HDAC1. Binding to the pocket region of RB1 may displace HDAC1 from RB1/E2F complexes, leading to activation of E2F target genes and cell cycle progression. Conversely, displacement of HDAC1 from SP1 bound to the CDKN1A promoter leads to increased expression of this CDK inhibitor and blocks cell cycle progression. Also antagonizes PAWR mediated induction of aberrant amyloid peptide production in Alzheimer disease (presenile and senile dementia), although the molecular basis for th [...] (560 aa)
      score_image score_image   score_image   0.751
IMP3
IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast); Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing (184 aa)
      score_image     score_image   0.738
GNL3
guanine nucleotide binding protein-like 3 (nucleolar); May be required to maintain the proliferative capacity of stem cells. Stabilizes MDM2 by preventing its ubiquitination, and hence proteasomal degradation (By similarity) (549 aa)
      score_image score_image       0.736
WDR46
WD repeat domain 46 (610 aa)
      score_image score_image   score_image   0.734
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: medium (45%)