TTC39C protein (Homo sapiens) - STRING network view

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TTC39C

tetratricopeptide repeat domain 39C (583 aa)

Predicted Functional Partners:

ACAT2

0.644

THOP1

0.644

TMEM19

0.582

DEPDC5

0.514

AMDHD1

0.457

MAGEB16

0.418

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAT2	TTC39C	ENSP00000356015	ENSP00000323645	acetyl-CoA acetyltransferase 2	tetratricopeptide repeat domain 39C	0.644
AMDHD1	TTC39C	ENSP00000266736	ENSP00000323645	amidohydrolase domain containing 1	tetratricopeptide repeat domain 39C	0.457
DEPDC5	TTC39C	ENSP00000371546	ENSP00000323645	DEP domain containing 5	tetratricopeptide repeat domain 39C	0.514
MAGEB16	TTC39C	ENSP00000382867	ENSP00000323645	melanoma antigen family B, 16	tetratricopeptide repeat domain 39C	0.418
THOP1	TTC39C	ENSP00000304467	ENSP00000323645	thimet oligopeptidase 1; Involved in the metabolism of neuropeptides under 20 amino acid residues long. Involved in cytoplasmic peptide degradation. Able to degrade the beta-amyloid precursor protein and generate amyloidogenic fragments	tetratricopeptide repeat domain 39C	0.644
TMEM19	TTC39C	ENSP00000266673	ENSP00000323645	transmembrane protein 19	tetratricopeptide repeat domain 39C	0.582
TTC39C	ACAT2	ENSP00000323645	ENSP00000356015	tetratricopeptide repeat domain 39C	acetyl-CoA acetyltransferase 2	0.644
TTC39C	AMDHD1	ENSP00000323645	ENSP00000266736	tetratricopeptide repeat domain 39C	amidohydrolase domain containing 1	0.457
TTC39C	DEPDC5	ENSP00000323645	ENSP00000371546	tetratricopeptide repeat domain 39C	DEP domain containing 5	0.514
TTC39C	MAGEB16	ENSP00000323645	ENSP00000382867	tetratricopeptide repeat domain 39C	melanoma antigen family B, 16	0.418
TTC39C	THOP1	ENSP00000323645	ENSP00000304467	tetratricopeptide repeat domain 39C	thimet oligopeptidase 1; Involved in the metabolism of neuropeptides under 20 amino acid residues long. Involved in cytoplasmic peptide degradation. Able to degrade the beta-amyloid precursor protein and generate amyloidogenic fragments	0.644
TTC39C	TMEM19	ENSP00000323645	ENSP00000266673	tetratricopeptide repeat domain 39C	transmembrane protein 19	0.582

Experiments

Cooccurrence

Textmining

Neighborhood

Databases

Fusion

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About