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STRINGSTRING
ANKRD55 ANKRD55 GIN1 GIN1 PGBD5 PGBD5 C5orf30 C5orf30 AFF3 AFF3 FAM69A FAM69A SPRED2 SPRED2
"C5orf30" - chromosome 5 open reading frame 30 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf30chromosome 5 open reading frame 30; Probably plays a role in trafficking of proteins via its interaction with UNC119 and UNC119B cargo adapters- may help the release of UNC119 and UNC119B cargo or the recycling of UNC119 and UNC119B. May play a role in ciliary membrane localization via its interaction with UNC119B and protein transport into photoreceptor cells (206 aa)    
Predicted Functional Partners:
FAM69A
family with sequence similarity 69, member A (428 aa)
            score_image   0.537
PGBD5
piggyBac transposable element derived 5 (554 aa)
            score_image   0.505
ANKRD55
ankyrin repeat domain 55 (614 aa)
            score_image   0.472
AFF3
AF4/FMR2 family, member 3 (1251 aa)
            score_image   0.450
SPRED2
sprouty-related, EVH1 domain containing 2; Tyrosine kinase substrate that inhibits growth-factor- mediated activation of MAP kinase (418 aa)
            score_image   0.420
GIN1
gypsy retrotransposon integrase 1 (522 aa)
            score_image   0.412
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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