Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
COL9A3 COL9A3 COL9A2 COL9A2 ITGB1 ITGB1 COL9A1 COL9A1 ITGA11 ITGA11 COL11A1 COL11A1 ITGB6 ITGB6 COL1A1 COL1A1 COL1A2 COL1A2 ITGB8 ITGB8 ITGB5 ITGB5
"ITGA11" - integrin, alpha 11 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA11integrin, alpha 11; Integrin alpha-11/beta-1 is a receptor for collagen (1188 aa)    
Predicted Functional Partners:
ITGB1
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (798 aa)
        score_image score_image score_image   0.969
COL1A1
collagen, type I, alpha 1 (1464 aa)
          score_image score_image   0.919
COL1A2
collagen, type I, alpha 2 (1366 aa)
          score_image score_image   0.909
ITGB6
integrin, beta 6; Integrin alpha-V/beta-6 is a receptor for fibronectin and cytotactin. It recognizes the sequence R-G-D in its ligands. Internalisation of integrin alpha-V/beta-6 via clathrin-mediated endocytosis promotes carcinoma cell invasion (788 aa)
          score_image score_image   0.904
COL9A2
collagen, type IX, alpha 2; Structural component of hyaline cartilage and vitreous of the eye (689 aa)
          score_image     0.900
COL9A1
collagen, type IX, alpha 1 (921 aa)
          score_image     0.900
COL9A3
collagen, type IX, alpha 3; Structural component of hyaline cartilage and vitreous of the eye (684 aa)
          score_image     0.900
COL11A1
collagen, type XI, alpha 1 (1806 aa)
          score_image score_image   0.880
ITGB5
integrin, beta 5; Integrin alpha-V/beta-5 is a receptor for fibronectin. It recognizes the sequence R-G-D in its ligand (799 aa)
          score_image score_image   0.874
ITGB8
integrin, beta 8; Integrin alpha-V/beta-8 is a receptor for fibronectin (769 aa)
          score_image score_image   0.871
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: low (23%)